Resources

Published Resources

Appendix tables, code, raw reads, and source data for Liu et al., "Rapid Specific Detection of Oral Bacteria Using Cas13-based SHERLOCK" (2023): HERE

Reproducible narrative methods for assembly and analysis of HMT-352 genomes by Dan Utter (Nie et al., 2022, mSystems). Download HERE.

Narrative workflow for analyzing 16S rRNA profiling by Dan Utter (Chipashvili et al., 2021, Cell Host & Microbe). Download HERE.

Constructing phylogenome tree of select Actinomyces strains using gene clusters by Dan Utter (Utter et al., 2020, ISME). Download HERE.